The ISDR interacts with PKR and regulates replication of HCV in vitro (28).

Mutations in the ISDR affect the interaction with PKR and may inhibit viral replication. In the case of the IRRDR, the molecular mechanism underlying the possible involvement of this region in IFN responsiveness of the virus Selleckchem Rucaparib is still unknown. The significant difference among IRRDR sequence patterns may suggest genetic flexibility of this region. Thus, changes in the IRRDR might be capable of modulating intracellular antiviral activity, or maybe the genetic flexibility of this region is accompanied by compensatory changes elsewhere in the viral genome and these compensatory changes affect overall viral fitness and responses to IFN therapy (29–31) When we investigated the impact of various sequences patterns at positions 70 and 91 of the core protein, we observed that single point mutation at position 70 (Gln70 CX-5461 ic50 vs non-Gln70) was the only factor that significantly

influenced treatment responses. This result is consistent with recent reports, including a recent multi-center study in Japan that identified Gln70 as a predictive factor for poor responses to PEG-IFN/RBV treatment (14, 13, 30). The core region of HCV interacts with several host factors and modulates expression of numerous genes, including down-regulating IFN-induced antiviral genes, thus inhibiting the antiviral action of IFN (32, 33). Therefore, it would also be interesting to investigate the impact of polymorphism, both at position 70 and of NS5A, on HCV pathogenesis and IFN sensitivity. Multivariate logistic regression analysis of all available data, including those of NS5A and core polymorphisms in this study and the data on NS3 polymorphism in the same patient cohort published elsewhere (16), identified IRRDR ≥ 4 and group A of NS3 as independent viral factors that are significantly associated with a SVR, and IRRDR ≤ 3,

and Gln70 of the core protein as independent factors significantly associated with a null response (Table 5). No combinations of these criteria produced a more significant correlation with virological responses to PEG-IFN/RBV therapy (data not shown). In conclusion, the present results demonstrate that sequence heterogeneity of NS5A, why especially in IRRDR and ISDR, and a single-point mutation at position 70 of the core protein of HCV-1b are significantly correlated with virological responses to PEG-IFN/RBV therapy. Also, the results emphasize the possible functional importance of NS5A and core protein in regulating viral responsiveness to PEG-IFN/RBV. This study was supported in part by Health and Labor Sciences Research Grants from the Ministry of Health, Labor and Welfare, Japan, and a Science and Technology Research Partnership for Sustainable Development grant from the Japan Science and Technology Agency and Japan International Cooperation Agency.