J Biol Chem 1998,273(23):14077–14080.PubMedCrossRef 20. Tobe T, Sasakawa C, Okada N, Honma Y, Yoshikawa M: vacB, a
novel chromosomal gene required for expression of virulence genes on the large plasmid of Shigella flexneri . J Bacteriol 1992,174(20):6359–6367.PubMed 21. Tsao MY, Lin TL, Hsieh PF, Wang JT: The 3′-to-5′ exoribonuclease (encoded by HP1248) of Helicobacter pylori regulates motility and apoptosis-inducing genes. J Bacteriol 2009,191(8):2691–2702.PubMedCrossRef 22. Campos-Guillen J, Arvizu-Gomez JL, Temsirolimus supplier Jones GH, Olmedo-Alvarez G: Characterization of tRNA(Cys) processing in a conditional Bacillus subtilis CCase mutant reveals the participation of RNase R in its quality control. Microbiology 2010,156(Pt 7):2102–2111.PubMedCrossRef 23. Hong SJ, Tran QA, Keiler KC: Cell cycle-regulated degradation of tmRNA is controlled
by RNase R and SmpB. Mol Microbiol 2005,57(2):565–575.PubMedCrossRef 24. learn more Purusharth RI, Madhuri B, Ray MK: Exoribonuclease R in Pseudomonas syringae is essential for growth at low temperature and plays a novel role in the 3′ end processing of 16 and 5 S ribosomal RNA. J Biol Chem 2007,282(22):16267–16277.PubMedCrossRef 25. Richards J, Sundermeier T, Svetlanov A, Karzai AW: Quality control of bacterial mRNA decoding and decay. Biochim Biophys Acta 2008,1779(9):574–582.PubMedCrossRef 26. Keiler KC: Biology of trans-translation. Annu Rev Microbiol 2008, 62:133–151.PubMedCrossRef 27. Richards J, Mehta P, Karzai AW: RNase R degrades non-stop mRNAs selectively in an SmpB-tmRNA-dependent manner. MM-102 Mol Microbiol 2006,62(6):1700–1712.PubMedCrossRef 28. Liang W, Deutscher MP: A novel mechanism for ribonuclease regulation: transfer-messenger RNA (tmRNA) and its associated protein SmpB regulate the stability of RNase R. J Biol Chem 2010,285(38):29054–29058.PubMedCrossRef 29.
Liang W, Malhotra A, Deutscher MP: Acetylation regulates the stability of a bacterial protein: growth stage-dependent modification of RNase R. Mol Cell 2011,44(1):160–166.PubMedCrossRef 30. Andrade JM, Pobre V, Silva IJ, Domingues S, Arraiano CM: The role of 3′-5′ exoribonucleases in RNA degradation. Prog Mol Biol Transl Sci 2009, 85:187–229.PubMedCrossRef 31. Acebo P, Martin-Galiano Thalidomide AJ, Navarro S, Zaballos A, Amblar M: Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae. RNA 2012,18(3):530–546.PubMedCrossRef 32. Wagner EG, Vogel J: Approaches to Identify Novel Non-messenger RNAs in Bacteria and to Investigate their Biological Functions: Functional Analysis of Identified Non-mRNAs. In Handbook of RNA Biochemistry. Edited by: Hartmann RK, Bindereif A, Schõn A, Westhof E. Weinheim: WILEY-VCH Verlag GmbH & Co. KGaA; 2005:614–642. 33. Charpentier X, Faucher SP, Kalachikov S, Shuman HA: Loss of RNase R induces competence development in Legionella pneumophila . J Bacteriol 2008,190(24):8126–8136.